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Collaborations

The collaborative Resource projects on the following list were selected based on their capacity to benefit from the Resource's capabilities, their scientific and biomedical relevance, and their ability to challenge the core technology and specific technological aims within the Resource:

Proteomics to Characterize and Understand the Host-Pathogen Interactome at the Intestinal Epithelial Surface Following Surgical Injury
John C. Alverdy, M.D.
Department of Surgery
University of Chicago Medicine, Chicago, Illinois

Analysis of Cerebral Spinal Fluid Proteome in a Preclinical Nonhuman Primate Model of Stroke
Frances Rene Bahat, Ph.D. AND
Mary P. Stenzel-Poore, Ph.D.
Department of Molecular Microbiology and Immunology
Oregon Health and Science University , Portland, Oregon

Risk Factors, Pathology, and Clinical Expression of Alzheimer's Disease
David Bennett, M.D.
Rush Alzheimer's Disease Center
Rush University Medical Center, Chicago, Illinois
AND
Philip De Jager, M.D.
Department of Neurology
Columbia University Medical Center, New York, New York

Turnover Rates in the Protein Pool of C. Elegans with Extreme Lifespan
Bart P. Braeckman, Ph.D.
Department of Biology
Ghent University, Ghent, Belgium

Proteomic Study of Hepatic Metabolism Regulated by Hypothalamic Pathways
Christoph Buettner, M.D.
Buettner Laboratory for Metabolism and Diabetes
The Mount Sinai Hospital, New York, New York

Pathogenesis of Bacterial Vaginosis and Integrated Omics
David N. Fredricks, M.D.
Vaccine and Infectious Disease Division
Fred Hutchinson Cancer Research Center, Seattle, WA

Functional Characterization of Drug Resistance in Plasmodium Falciparum and Mycobacterium Tuberculosis
Christophe Grundner, Ph.D.
University of Washington, Seattle, WA

Defining the Bacterial and Host Protein Modifications of the Chlamydia Containing Vacuole and their Cleavage by Cysteine Proteases
Kevin Hybiske, Ph.D.
Hybiske Laboratory
University of Washington, Seattle, WA

Mitochondrial Proteomic Profile Changed by JNK Interaction with Sab
Neil Kaplowitz, Ph.D.
University of Southern California, Los Angeles, California

Phosphoproteome Analysis to Identify Signaling Cascades Associated with Ultrasound Therapy
Sanjiv Kaul, M.D. AND
Azzdine Ammi, Ph.D.
Oregon Health and Science University (OHSU), Portland, Oregon

Single Islet Proteomics for Investigating the Mechanisms of Beta-Cell Function
AND
Examination of LIRKO Islets and Serum Using Quantitative Proteomics Approaches
Rohit N. Kulkarni, M.D., Ph.D.
Joslin Diabetes Center, Boston, Massachusetts

Proteomic Analysis of Pseudomonas aeruginosa Persisters
Kim Lewis, Ph.D.
Department of Biology
Northeastern University , Boston, Massachusetts

Analysis of Ubiquitination Signaling Regulated by Bacterial Toxins
Zhao-Qing Luo, Ph.D.
Department of Biological Sciences
Purdue University, West Lafayette, Indiana

Discovery of Oncogenic Viruses
Patrick S. Moore, M.D., Ph.D.
Cancer Virology Program
University of Pittsburgh Cancer Institute, Pittsburgh, Pennsylvania

Large Scale High Throughput Analsysis of MrOS Participants for Markers of Mortality
Eric S. Orwoll
Oregon Health and Science University (OHSU), Portland, Oregon

Regulatory Protein Quantification in Trail-Mediated Apoptosis
Peter Sorger, Ph.D. AND
Mario Niepel, Ph.D.
Sorger Lab
Department of Systems Biology
Harvard Medical School , Boston, Massachusetts

Proteomic Profiling to Understand Iron Metabolism in Breast Cancer
Suzy V. Torti, Ph.D.
Department of Molecular and Cell Biology
AND
Reinhard C. Laubenbacher, Ph.D.
Center for Quantitative Medicine
University of Connecticut Health Center, Farmington, Connecticut

Proteomic Analysis of Alcoholic Hepatitis in the Mouse Model
Hidekazu Tsukamoto, D.V.M, Ph.D.
Department of Pathology
Keck School of Medicine of University of Southern California, Los Angeles, California

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