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Posters and Presentations

Available posters and presentations highlighting research projects

Additional proteomics related posters and presentations from PNNL can be found on the omics.pnl.gov website

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ASMS 2010 Posters and Oral Presentations

	Towards a Microfluidic nanoESI-MS Platform for Sample Preparation and Analysis of Single Cells Nitin Agrawal, R Kelly, X Sun, K Tang, and RD Smith.
	Proteome analysis of cerebrospinal fluid: Cross sectional and longitudinal analysis of HIV infected patients (slides from oral presentation) Thomas Angel, JM Jacobs, R Price, S Spudich, M Gritsenko, D Fuchs, L Rosengren, H Zetterberg, DG Camp II, and RD Smith.
	Protein abundance dynamics in the unicellular cyanobacterium Cyanothece ATCC 51142 during light-dark cycle Uma K. Aryal, JM Jacobs, J Stöckel, CD Nicora, HB Pakrasi, DW Koppenaal, LA Sherman, and RD Smith.
	High-Throughput Proteomics Platform and Software for Improved Biomarker Discovery Erin S. Baker, YM Ibrahim, DC Prior, WF Danielson III, KK Weitz, AR Shah, GW Slysz, BL LaMarche, KL Crowell, JR Stanley, GA Anderson, JI Shutthanandan, RD Smith, and ME Belov.
	Pulsed Multiple Reaction Monitoring Mode: The Novel Sensitive Approach for Biomolecule Quantitation Mikhail E. Belov, S Prasad, DC Prior, WF Danielson III, KK Weitz, VA Petyuk, YM Ibrahim, and RD Smith.
	Dynamic evolution of the macaque pulmonary proteome response to highly pathogenic avian influenza and Spanish Flu influenza infections (slides from oral presentation) Joseph Brown, R Palermo, JM Jacobs, M Gritsenko, M Katze, and RD Smith.
	Improving LC-MS throughput for phosphoproteomics research Therese W. Clauss, RJ Moore, M Gritsenko, Y Wang, R Zhao, SO Purvine, WB Chrisler, A Shukla, ME Monroe, F Yang, and RD Smith.
	Nano-Electrospray Ionization Sources Operating at Atmospheric and Sub-Atmospheric Pressure (slides from oral presentation) R. Brent Dixon, JS Page, I Marginean, N Agrawal, RT Kelly, K Tang, and RD Smith.
	New Strategies for High Pressure-Assisted Digestion in Proteomics Kim K. Hixson, D López-Ferrer, KK Weitz, RJ Moore, SR Kronewitter, HH Smallwood, ME Belov, and RD Smith.
	Evaluation of a nanoLC-IMS-TOF Platform for Broad and Sensitive Quantitative Proteomics Measurements Yehia M. Ibrahim, ES Baker, WF Danielson III, DC Prior, RD Smith and ME Belov.
	Targeted Quantitative Proteomics Using Selected Reaction Monitoring (SRM)- Mass Spectrometry Coupled with an 18O-labeled Reference as Internal Standards Jong-Seo Kim, E Robinson, BL Champion, BO Petritis, TL Fillmore, RJ Moore, T Liu, DG Camp II, RD Smith, and WJ Qian.
	Development of a new orthogonal ion injection method coupled to dual ion funnel source for highly sensitive and high-throughput MS analysis Ruwan T. Kurulugama, RD Smith, and ME Belov.
	A mathematical approach for reference selection in high throughput proteomics Brian L. LaMarche, SJ Callister, AR Shah, AT Wright, MJ Wilkins, ME Monroe, K Crowell, GA Anderson, and RD Smith.
	Application of High Pressure and Highly Stable Trypsin Aggregate Coating on Superparamagnetic Magnetite/Silica Nanoparticles for High Performance Proteomics Daniel López-Ferrer, B Lee, J Kim, and RD Smith.
	Achieving ~50% ion source efficiency in ESI-MS Ioan Marginean, JS Page, AV Tolmachev, K Tang, and RD Smith.
	DtaRefinery: A Software Tool for Eliminating Systematic Errors from Parent Ion Mass Measurements in Tandem Mass Spectra Datasets Vladislav A. Petyuk, AM Mayampurath, ME Monroe, AD Polpitiya, SO Purvine, GA Anderson, DG Camp II, and RD Smith.
	Interfacing an Ion Funnel Trap (IFT) to a Triple Quadrupole Analyzer for Enhancing Sensitivity in Multiple Reaction Monitoring (MRM) Analyses Satendra Prasad, DC Prior, WF Danielson III, KK Weitz, YM Ibrahim, RD Smith, and ME Belov.
	The temporal proteome response to severe traumatic injury in human leukocytes revealed by large-scale quantitative clinical proteomics using an 18O-labeled reference Wei-Jun Qian, CN Nicora, BO Petritis, AA Schepmoes, RJ Moore, ME Monroe, LL Moldawer, RV Maier, RG Tompkins, DG Camp, and RD Smith.
	High sensitivity LC-ESI-SRM MS analysis using multi-capillary inlet/tandem electrodynamic ion funnel interface Errol W. Robinson, L Tang, T Liu, A Mordehai, A Fandino, E Aisawa, and RD Smith.
	Next generation data exchange format for mass spectrometry Anuj R. Shah, ME Monroe, Y Shi, B LaMarche, K Crowell, GS Slysz, GA Anderson, and RD Smith.
	Differential Ion Mobility Spectrometry (FAIMS) with Resolving Power up to 300 and its Application to Lipid and Peptide Analyses Alexandre A. Shvartsburg, GI Mezengie, WF Danielson, DC Prior, K Tang, TO Metz, RD Smith, N Leveque.
	The DeconTools Framework: an Application Programming Interface Enabling Flexibility in Accurate Mass and Time Tag Workflows for Proteomics and Metabolomics Gordon W. Slysz, ES Baker, AR Shah, N Jaitly, GA Anderson, and RD Smith.
	Improved normalization and discovery in label-free LC-MS proteomics Tom Taverner, AR Dabney, SO Purvine, GA Anderson, MS Lipton, and RD Smith.
	Top-down Characterization of Core Histones using an Online 2D Nanocapillary LC System Zhixin Tian, Rui Zhao, N Tolić, RJ Moore, DL Stenoien, EW Robinson, RD Smith, L Paša-Tolić.
	Modeling the Ion Funnel Trap for Ion Mobility Spectrometry Aleksey V. Tolmachev, Y Ibrahim, RD Smith, and ME Belov.
	Development of an atmospheric monitoring mass spectrometer for universal real-time applications Karl K. Weitz, RJ Moore, KK Hixson, D López-Ferrer, TW Clauss, CM Taylor, and RD Smith.
	Analysis of the Euplotes genome using proteomics approaches Fang Xie, AV Petyuk, AV Lobanov, AA Turanov, LA Klobutcher, HM Brewer, MA Gritsenko, RJ Moore, DG Camp II, VN Gladyshev, and RD Smith.
	Quantitatively Probing Cellular Membrane Proteome Dynamics Using Membrane-Impermeable Chemical Probes and Proteomics Analysis (slides from oral presentation) Haizhen Zhang , WJ Qian, T Liu, RN Brown, ME Monroe, SO Purvine, RJ Moore, L Shi, MF Romine, JK Fredrickson, J Shutthanandan, WB Chrisler, SH Wiley, L Paša-Tolić, RD Smith, MS Lipton.
	Extensive Oxidative Protein Modifications Observed in Human Plasma and Candidate Biomarkers of Systemic Chronic Inflammatory and Oxidative Stress Xu Zhang, MA Gritsenko, ME Monroe, RJ Moore, DG Camp II, DJ Bigelow, Wei-Jun Qian, JM Jacobs, JG Pounds, and RD Smith.
	Identification of growth factors in mouse plasma by immunoaffinity depletion, low molecular weight protein enrichment and LC-MS/MS analysis Jian-Ying Zhou, JI Shutthanandan, BO Petritis, KK Weitz, RJ Moore, DG Camp II, RN Kulkarni, RD Smith, and WJ Qian.

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